Introduction - If you have any usage issues, please Google them yourself
Packet : 71477190jgap_3.3.3_full.zip filelist
build.xml
changelog.txt
compile.bat
doc/
doc/allclasses-frame.html
doc/allclasses-noframe.html
doc/constant-values.html
doc/deprecated-list.html
doc/examples/
doc/examples/audit/
doc/examples/audit/CoinsExample.html
doc/examples/audit/CoinsExampleFitnessFunction.html
doc/examples/audit/package-frame.html
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doc/examples/audit/package-tree.html
doc/examples/chromInit/
doc/examples/chromInit/ChromosomeInit.html
doc/examples/chromInit/MaxFunction.html
doc/examples/chromInit/package-frame.html
doc/examples/chromInit/package-summary.html
doc/examples/chromInit/package-tree.html
doc/examples/config/
doc/examples/config/MaximizingFunction.html
doc/examples/config/MaximizingFunctionFitnessFunction.html
doc/examples/config/package-frame.html
doc/examples/config/package-summary.html
doc/examples/config/package-tree.html
doc/examples/distinctGenes/
doc/examples/distinctGenes/Main.html
doc/examples/distinctGenes/MyChromosome.html
doc/examples/distinctGenes/package-frame.html
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doc/examples/distinctGenes/SampleFitnessFunction.html
doc/examples/dynamicMutation/
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doc/examples/dynamicMutation/DynamicMutationExample.html
doc/examples/dynamicMutation/DynamicMutationFitnessFunction.html
doc/examples/dynamicMutation/package-frame.html
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doc/examples/dynamicMutation/package-tree.html
doc/examples/energy/
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doc/examples/energy/CoinsEnergyFitnessFunction.html
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doc/examples/equalDistribution/
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doc/examples/functionFinder/Repository.html
doc/examples/functionFinder/Term.html
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doc/examples/functionFinder/Utility.html
doc/examples/gp/
doc/examples/gp/anttrail/
doc/examples/gp/anttrail/AntCommand.html
doc/examples/gp/anttrail/AntMap.html
doc/examples/gp/anttrail/AntTrailProblem.html
doc/examples/gp/anttrail/AntTreeBranchRenderer.html
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doc/examples/gp/anttrail/IfFoodAheadElse.html
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doc/examples/gp/anttrail/IfFoodAheadRight.html
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doc/examples/gp/anttrail/Right.html
doc/examples/gp/anttrail/TurnToFood.html
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doc/examples/gp/tictactoe/
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doc/examples/gp/tictactoe/CountStones.html
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doc/examples/knapsack/
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doc/examples/MinimizingMakeChange.html
doc/examples/MinimizingMakeChangeCached.html
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doc/examples/multidimension/
doc/examples/multiobjective/
doc/examples/multiobjective/MOFitnessEvaluator.html
doc/examples/multiobjective/MultiObjectiveExample.html
doc/examples/multiobjective/MultiObjectiveExample.MOFitnessComparator.html
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doc/examples/salesman/
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doc/examples/salesman/TravellingSalesman.html
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doc/examples/supergene/Force.html
doc/examples/supergene/NickelsPenniesSupergene.html
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doc/org/jgap/gp/terminal/
doc/org/jgap/gp/Terminal.html
doc/org/jgap/gp/terminal/Argument.html
doc/org/jgap/gp/terminal/Constant.html
doc/org/jgap/gp/terminal/False.html
doc/org/jgap/gp/terminal/NOP.html
doc/org/jgap/gp/terminal/package-frame.html
doc/org/jgap/gp/terminal/package-summary.html
doc/org/jgap/gp/terminal/package-tree.html
doc/org/jgap/gp/terminal/Terminal.html
doc/org/jgap/gp/terminal/True.html
doc/org/jgap/gp/terminal/Variable.html
doc/org/jgap/gp/Variable.html
doc/org/jgap/gui/
doc/org/jgap/gui/ConfigFrame.ConfigListSelectionListener.html
doc/org/jgap/gui/ConfigFrame.html
doc/org/jgap/gui/ConfigFrame.ListButtonListener.html
doc/org/jgap/gui/ConfigFrame.ListGroup.html
doc/org/jgap/gui/GUIManager.html
doc/org/jgap/gui/package-frame.html
doc/org/jgap/gui/package-summary.html
doc/org/jgap/gui/package-tree.html
doc/org/jgap/IApplicationData.html
doc/org/jgap/IBreeder.html
doc/org/jgap/IBusinessKey.html
doc/org/jgap/IChromosome.html
doc/org/jgap/IChromosomePool.html
doc/org/jgap/ICloneHandler.html
doc/org/jgap/ICompareToHandler.html
doc/org/jgap/ICompositeGene.html
doc/org/jgap/IGeneConstraintChecker.html
doc/org/jgap/IGeneticOperatorConstraint.html
doc/org/jgap/IHandler.html
doc/org/jgap/IInitializer.html
doc/org/jgap/IJGAPFactory.html
doc/org/jgap/impl/
doc/org/jgap/impl/AveragingCrossoverOperator.html
doc/org/jgap/impl/BestChromosomesSelector.html
doc/org/jgap/impl/BooleanGene.html
doc/org/jgap/impl/BulkFitnessOffsetRemover.html
doc/org/jgap/impl/CauchyRandomGenerator.html
doc/org/jgap/impl/ChainOfSelectors.html
doc/org/jgap/impl/ChromosomePool.html
doc/org/jgap/impl/CompositeGene.html
doc/org/jgap/impl/CrossoverOperator.html
doc/org/jgap/impl/DefaultCloneHandler.html
doc/org/jgap/impl/DefaultCompareToHandler.html
doc/org/jgap/impl/DefaultConfiguration.html
doc/org/jgap/impl/DefaultCrossoverRateCalculator.html
doc/org/jgap/impl/DefaultInitializer.html
doc/org/jgap/impl/DefaultMutationRateCalculator.html
doc/org/jgap/impl/DoubleGene.html
doc/org/jgap/impl/DynamicMutationActuator.html
doc/org/jgap/impl/fitness/
doc/org/jgap/impl/fitness/package-frame.html
doc/org/jgap/impl/fitness/package-summary.html
doc/org/jgap/impl/fitness/package-tree.html
doc/org/jgap/impl/fitness/TruthTableFitnessFunction.html
doc/org/jgap/impl/FittestPopulationMerger.html
doc/org/jgap/impl/FixedBinaryGene.html
doc/org/jgap/impl/GABreeder.html
doc/org/jgap/impl/GaussianMutationOperator.html
doc/org/jgap/impl/GaussianRandomGenerator.html
doc/org/jgap/impl/GreedyCrossover.html
doc/org/jgap/impl/IntegerGene.html
doc/org/jgap/impl/InversionOperator.html
doc/org/jgap/impl/JGAPFactory.html
doc/org/jgap/impl/job/
doc/org/jgap/impl/job/EvolveData.html
doc/org/jgap/impl/job/EvolveJob.html
doc/org/jgap/impl/job/EvolveResult.html
doc/org/jgap/impl/job/IEvolveJob.html
doc/org/jgap/impl/job/IJob.html
doc/org/jgap/impl/job/IPopulationSplitter.html
doc/org/jgap/impl/job/JobBase.html
doc/org/jgap/impl/job/JobData.html
doc/org/jgap/impl/job/JobResult.html
doc/org/jgap/impl/job/MaxFunction.html
doc/org/jgap/impl/job/package-frame.html
doc/org/jgap/impl/job/package-summary.html
doc/org/jgap/impl/job/package-tree.html
doc/org/jgap/impl/job/SimpleJobConsumer.html
doc/org/jgap/impl/job/SimplePopulationSplitter.html
doc/org/jgap/impl/MapGene.html
doc/org/jgap/impl/MutationOperator.html
doc/org/jgap/impl/NumberGene.html
doc/org/jgap/impl/package-frame.html
doc/org/jgap/impl/package-summary.html
doc/org/jgap/impl/package-tree.html
doc/org/jgap/impl/Pool.html
doc/org/jgap/impl/RangedSwappingMutationOperator.html
doc/org/jgap/impl/salesman/
doc/org/jgap/impl/salesman/package-frame.html
doc/org/jgap/impl/salesman/package-summary.html
doc/org/jgap/impl/salesman/package-tree.html
doc/org/jgap/impl/salesman/Salesman.html
doc/org/jgap/impl/salesman/SalesmanFitnessFunction.html
doc/org/jgap/impl/SetGene.html
doc/org/jgap/impl/StandardPostSelector.html
doc/org/jgap/impl/StockRandomGenerator.html
doc/org/jgap/impl/StringGene.html
doc/org/jgap/impl/SwappingMutationOperator.html
doc/org/jgap/impl/ThresholdSelector.html
doc/org/jgap/impl/TournamentSelector.html
doc/org/jgap/impl/TwoWayMutationOperator.html
doc/org/jgap/impl/WeightedRouletteSelector.html
doc/org/jgap/INaturalSelector.html
doc/org/jgap/InvalidConfigurationException.html
doc/org/jgap/IPersistentRepresentation.html
doc/org/jgap/IUniversalRateCalculator.html
doc/org/jgap/NaturalSelector.AgeFitnessValueComparator.html
doc/org/jgap/NaturalSelector.FitnessValueComparator.html
doc/org/jgap/NaturalSelector.html
doc/org/jgap/NaturalSelectorExt.html
doc/org/jgap/package-frame.html
doc/org/jgap/package-summary.html
doc/org/jgap/package-tree.html
doc/org/jgap/perf/
doc/org/jgap/Population.html
doc/org/jgap/RandomGenerator.html
doc/org/jgap/supergenes/
doc/org/jgap/supergenes/AbstractSupergene.html
doc/org/jgap/supergenes/package-frame.html
doc/org/jgap/supergenes/package-summary.html
doc/org/jgap/supergenes/package-tree.html
doc/org/jgap/supergenes/Supergene.html
doc/org/jgap/supergenes/SupergeneValidator.html
doc/org/jgap/supergenes/Validator.html
doc/org/jgap/UnsupportedRepresentationException.html
doc/org/jgap/util/
doc/org/jgap/util/ChromosomeFitnessComparator.html
doc/org/jgap/util/ClassKit.html
doc/org/jgap/util/CloneException.html
doc/org/jgap/util/CommandResult.html
doc/org/jgap/util/DateKit.html
doc/org/jgap/util/FileKit.html
doc/org/jgap/util/ICloneable.html
doc/org/jgap/util/ICommand.html
doc/org/jgap/util/JarClassLoader.html
doc/org/jgap/util/JarResources.html
doc/org/jgap/util/LRUCache.html
doc/org/jgap/util/MultiClassLoader.html
doc/org/jgap/util/NetworkKit.html
doc/org/jgap/util/NumberKit.html
doc/org/jgap/util/package-frame.html
doc/org/jgap/util/package-summary.html
doc/org/jgap/util/package-tree.html
doc/org/jgap/util/PersistableObject.html
doc/org/jgap/util/PluginDiscoverer.ClassFilter.html
doc/org/jgap/util/PluginDiscoverer.DirectoryFilter.html
doc/org/jgap/util/PluginDiscoverer.html
doc/org/jgap/util/randomHotBits.html
doc/org/jgap/util/randomJava.html
doc/org/jgap/util/randomLCG.html
doc/org/jgap/util/randomLEcuyer.html
doc/org/jgap/util/randomMCG.html
doc/org/jgap/util/randomX.html
doc/org/jgap/util/StringKit.html
doc/org/jgap/util/SystemKit.html
doc/org/jgap/util/tree/
doc/org/jgap/util/tree/package-frame.html
doc/org/jgap/util/tree/package-summary.html
doc/org/jgap/util/tree/package-tree.html
doc/org/jgap/util/tree/TreeBranchRenderer.html
doc/org/jgap/util/tree/TreeNodeRenderer.html
doc/org/jgap/util/tree/TreeVisualizer.html
doc/org/jgap/util/UniqueRandomGenerator.html
doc/org/jgap/xml/
doc/org/jgap/xml/GeneCreationException.html
doc/org/jgap/xml/ImproperXMLException.html
doc/org/jgap/xml/package-frame.html
doc/org/jgap/xml/package-summary.html
doc/org/jgap/xml/package-tree.html
doc/org/jgap/xml/XMLDocumentBuilder.html
doc/org/jgap/xml/XMLManager.html
doc/overview-frame.html
doc/overview-summary.html
doc/overview-tree.html
doc/package-list
doc/resources/
doc/resources/inherit.gif
doc/serialized-form.html
doc/stylesheet.css
examples/
examples/src/
examples/src/examples/
examples/src/examples/audit/
examples/src/examples/audit/CoinsExample.java
examples/src/examples/audit/CoinsExampleFitnessFunction.java
examples/src/examples/audit/package.html
examples/src/examples/chromInit/
examples/src/examples/chromInit/ChromosomeInit.java
examples/src/examples/chromInit/MaxFunction.java
examples/src/examples/chromInit/package.html
examples/src/examples/config/
examples/src/examples/config/MaximizingFunction.java
examples/src/examples/config/MaximizingFunctionFitnessFunction.java
examples/src/examples/config/package.html
examples/src/examples/distinctGenes/
examples/src/examples/distinctGenes/Main.java
examples/src/examples/distinctGenes/MyChromosome.java
examples/src/examples/distinctGenes/package.html
examples/src/examples/distinctGenes/SampleFitnessFunction.java
examples/src/examples/dynamicMutation/
examples/src/examples/dynamicMutation/DynamicMutationExample.java
examples/src/examples/dynamicMutation/DynamicMutationFitnessFunction.java
examples/src/examples/dynamicMutation/package.html
examples/src/examples/energy/
examples/src/examples/energy/CoinsEnergy.java
examples/src/examples/energy/CoinsEnergyFitnessFunction.java
examples/src/examples/energy/package.html
examples/src/examples/equalDistribution/
examples/src/examples/equalDistribution/MainClass.java
examples/src/examples/equalDistribution/package.html
examples/src/examples/equalDistribution/SampleFitnessFunction.java
examples/src/examples/equalDistribution/Vent.java
examples/src/examples/gp/
examples/src/examples/gp/anttrail/
examples/src/examples/gp/anttrail/AntCommand.java
examples/src/examples/gp/anttrail/AntMap.java
examples/src/examples/gp/anttrail/AntTrailProblem.java
examples/src/examples/gp/anttrail/AntTreeBranchRenderer.java
examples/src/examples/gp/anttrail/AntTreeNodeRenderer.java
examples/src/examples/gp/anttrail/IfFoodAheadElse.java
examples/src/examples/gp/anttrail/IfFoodAheadLeft.java
examples/src/examples/gp/anttrail/IfFoodAheadRight.java
examples/src/examples/gp/anttrail/Left.java
examples/src/examples/gp/anttrail/losaltos.trail
examples/src/examples/gp/anttrail/Move.java
examples/src/examples/gp/anttrail/package.html
examples/src/examples/gp/anttrail/Right.java
examples/src/examples/gp/anttrail/santafe.trail
examples/src/examples/gp/anttrail/TurnToFood.java
examples/src/examples/gp/Fibonacci.java
examples/src/examples/gp/FibonacciNodeValidator.java
examples/src/examples/gp/MathProblem.java
examples/src/examples/gp/package.html
examples/src/examples/gp/tictactoe/
examples/src/examples/gp/tictactoe/Board.java
examples/src/examples/gp/tictactoe/CountStones.java
examples/src/examples/gp/tictactoe/EvaluateBoard.java
examples/src/examples/gp/tictactoe/GameNodeValidator.java
examples/src/examples/gp/tictactoe/GameWonException.java
examples/src/examples/gp/tictactoe/IfColor.java
examples/src/examples/gp/tictactoe/IfIsFree.java
examples/src/examples/gp/tictactoe/IfIsOccupied.java
examples/src/examples/gp/tictactoe/IsOwnColor.java
examples/src/examples/gp/tictactoe/package.html
examples/src/examples/gp/tictactoe/PutStone.java
examples/src/examples/gp/tictactoe/PutStone1.java
examples/src/examples/gp/tictactoe/ReadBoard.java
examples/src/examples/gp/tictactoe/TicTacToeMain.java
examples/src/examples/gp/tictactoe/TicTacToeTest.java
examples/src/examples/gp/tictactoe/TransferBoardToMemory.java
examples/src/examples/grid/
examples/src/examples/grid/evolutionDistributed/
examples/src/examples/grid/evolutionDistributed/ClientEvolveStrategy.java
examples/src/examples/grid/evolutionDistributed/GridConfiguration.java
examples/src/examples/grid/evolutionDistributed/LocalEvolutionDemo.java
examples/src/examples/grid/evolutionDistributed/manifest.mf
examples/src/examples/grid/evolutionDistributed/MyClientFeedback.java
examples/src/examples/grid/evolutionDistributed/MyEvolveStrategy.java
examples/src/examples/grid/evolutionDistributed/MyGAWorker.java
examples/src/examples/grid/evolutionDistributed/MyGenotypeInitializer.java
examples/src/examples/grid/evolutionDistributed/MyRequestSplitStrategy.java
examples/src/examples/grid/evolutionDistributed/MyWorkerReturnStrategy.java
examples/src/examples/grid/evolutionDistributed/package.html
examples/src/examples/grid/evolutionDistributed/SampleFitnessFunction.java
examples/src/examples/grid/evolutionDistributed/ServerAndWorker.java
examples/src/examples/grid/fitnessDistributed/
examples/src/examples/grid/fitnessDistributed/ClientEvolveStrategy.java
examples/src/examples/grid/fitnessDistributed/FitnessSplitStrategy.java
examples/src/examples/grid/fitnessDistributed/GridConfiguration.java
examples/src/examples/grid/fitnessDistributed/manifest.mf
examples/src/examples/grid/fitnessDistributed/MyClientFeedback.java
examples/src/examples/grid/fitnessDistributed/MyGAWorker.java
examples/src/examples/grid/fitnessDistributed/MyRequest.java
examples/src/examples/grid/fitnessDistributed/MyRequestSplitStrategy.java
examples/src/examples/grid/fitnessDistributed/MyResult.java
examples/src/examples/grid/fitnessDistributed/MyWorkerFeedback.java
examples/src/examples/grid/fitnessDistributed/MyWorkerReturnStrategy.java
examples/src/examples/grid/fitnessDistributed/package.html
examples/src/examples/grid/fitnessDistributed/SampleFitnessFunction.java
examples/src/examples/grid/fitnessDistributed/ServerAndWorker.java
examples/src/examples/grid/mathProblemDistributed/
examples/src/examples/grid/mathProblemDistributed/ClientEvolveStrategy.java
examples/src/examples/grid/mathProblemDistributed/GridConfiguration.java
examples/src/examples/grid/mathProblemDistributed/manifest.mf
examples/src/examples/grid/mathProblemDistributed/MyClientFeedback.java
examples/src/examples/grid/mathProblemDistributed/MyEvolveStrategy.java
examples/src/examples/grid/mathProblemDistributed/MyGAWorker.java
examples/src/examples/grid/mathProblemDistributed/MyGenotypeInitializer.java
examples/src/examples/grid/mathProblemDistributed/MyRequestSplitStrategy.java
examples/src/examples/grid/mathProblemDistributed/MyWorkerReturnStrategy.java
examples/src/examples/grid/mathProblemDistributed/package.html
examples/src/examples/grid/mathProblemDistributed/SampleFitnessFunction.java
examples/src/examples/grid/mathProblemDistributed/ServerAndWorker.java
examples/src/examples/grid/package.html
examples/src/examples/grid/readme.txt
examples/src/examples/knapsack/
examples/src/examples/knapsack/KnapsackFitnessFunction.java
examples/src/examples/knapsack/KnapsackMain.java
examples/src/examples/knapsack/package.html
examples/src/examples/MinimizingFitnessFunctionCached.java
examples/src/examples/MinimizingMakeChange.java
examples/src/examples/MinimizingMakeChangeCached.java
examples/src/examples/MinimizingMakeChangeFitnessFunction.java
examples/src/examples/multidimension/
examples/src/examples/multidimension/KnapsackFitnessFunction.java
examples/src/examples/multidimension/KnapsackMain.java
examples/src/examples/multidimension/package.html
examples/src/examples/multiobjective/
examples/src/examples/multiobjective/MOFitnessEvaluator.java
examples/src/examples/multiobjective/MultiObjectiveExample.java
examples/src/examples/multiobjective/MultiObjectiveFitnessFunction.java
examples/src/examples/multiobjective/package.html
examples/src/examples/package.html
examples/src/examples/salesman/
examples/src/examples/salesman/package.html
examples/src/examples/salesman/TravellingSalesman.java
examples/src/examples/simpleBoolean/
examples/src/examples/simpleBooleanThreaded/
examples/src/examples/simpleBooleanThreaded/MaxFunction.java
examples/src/examples/simpleBooleanThreaded/package.html
examples/src/examples/simpleBooleanThreaded/SimpleExample.java
examples/src/examples/simpleBoolean/MaxFunction.java
examples/src/examples/simpleBoolean/package.html
examples/src/examples/simpleBoolean/SimpleExample.java
examples/src/examples/supergene/
examples/src/examples/supergene/AbstractChangeFitnessFunction.java
examples/src/examples/supergene/AbstractSupergeneTest.java
examples/src/examples/supergene/Force.java
examples/src/examples/supergene/NickelsPenniesSupergene.java
examples/src/examples/supergene/package.html
examples/src/examples/supergene/SupergeneChangeFitnessFunction.java
examples/src/examples/supergene/SupergeneSample.java
examples/src/examples/supergene/SupergeneSampleApplicationTest.java
examples/src/examples/supergene/SupergenesPerformanceTest.java
examples/src/examples/supergene/TotalSupergeneTest.java
examples/src/examples/supergene/WithoutSupergeneChangeFitFForTesting.java
examples/src/examples/supergene/WithoutSupergeneSample.java
examples/test/
examples/test/examples/
examples/test/examples/AllExampleTests.java
examples/test/examples/supergene/
examples/test/examples/supergene/TotalSupergeneTest.java
HOWTO Running the Example.txt
jgap-examples.jar
jgap-meta.con
jgap-tests.jar
jgap.jar
jgapTest.con
lib/
lib/commons-cli-1.0.jar
lib/commons-codec-1.3.jar
lib/commons-lang-2.1.jar
lib/jcgrid.jar
lib/junit-addons-1.4.jar
lib/junit3.8.1.jar
lib/log4j.jar
lib/readme.txt
lib/TableLayout.jar
lib/trove-2.0.2.jar
lib/xpp3_min-1.1.3.4.O.jar
lib/xstream-1.2.2.jar
licence/
licence/license apache.txt
licence/license apache2.txt
licence/license jcgrid.txt
licence/license LGPL.txt
licence/license MPL.txt
licence/license UUID.txt
licence/license.txt
licence/NOTICE.txt
log4j.properties
pom.xml
readme.txt
run_tests.bat
src/
src/log4j.properties
src/META-INF/
src/META-INF/manifest.mf
src/org/
src/org/jgap/
src/org/jgap/audit/
src/org/jgap/audit/Evaluator.java
src/org/jgap/audit/KeyedValue.java
src/org/jgap/audit/KeyedValues.java
src/org/jgap/audit/KeyedValues2D.java
src/org/jgap/audit/package.html
src/org/jgap/audit/PermutingConfiguration.java
src/org/jgap/BaseChromosome.java
src/org/jgap/BaseGene.java
src/org/jgap/BaseGeneticOperator.java
src/org/jgap/BaseRateCalculator.java
src/org/jgap/BreederBase.java
src/org/jgap/BulkFitnessFunction.java
src/org/jgap/CachedFitnessFunction.java
src/org/jgap/Chromosome.java
src/org/jgap/Configuration.java
src/org/jgap/data/
src/org/jgap/data/config/
src/org/jgap/data/config/ConfigData.java
src/org/jgap/data/config/ConfigException.java
src/org/jgap/data/config/ConfigFileReader.java
src/org/jgap/data/config/ConfigProperty.java
src/org/jgap/data/config/Configurable.java
src/org/jgap/data/config/ConfigurationHandler.java
src/org/jgap/data/config/ConfigWriter.java
src/org/jgap/data/config/IConfigInfo.java
src/org/jgap/data/config/MetaConfig.java
src/org/jgap/data/config/MetaConfigException.java
src/org/jgap/data/config/package.html
src/org/jgap/data/config/RootConfigurationHandler.java
src/org/jgap/data/DataElement.java
src/org/jgap/data/DataElementList.java
src/org/jgap/data/DataElementsDocument.java
src/org/jgap/data/DataTreeBuilder.java
src/org/jgap/data/DocumentBuilderBase.java
src/org/jgap/data/IDataCreators.java
src/org/jgap/data/IDataElement.java
src/org/jgap/data/IDataElementList.java
src/org/jgap/data/package.html
src/org/jgap/DefaultFitnessEvaluator.java
src/org/jgap/DeltaFitnessEvaluator.java
src/org/jgap/distr/
src/org/jgap/distr/Breeder.java
src/org/jgap/distr/Culture.java
src/org/jgap/distr/CultureMemoryCell.java
src/org/jgap/distr/DistributedGenotype.java
src/org/jgap/distr/grid/
src/org/jgap/distr/grid/common/
src/org/jgap/distr/grid/common/BasicContext.java
src/org/jgap/distr/grid/common/ClientStatus.java
src/org/jgap/distr/grid/common/CommonConfiguration.java
src/org/jgap/distr/grid/common/NoWorkResultsFoundException.java
src/org/jgap/distr/grid/common/package.html
src/org/jgap/distr/grid/common/WorkRequestsSendException.java
src/org/jgap/distr/grid/common/WorkResultNotFoundException.java
src/org/jgap/distr/grid/DefaultEvolveStrategy.java
src/org/jgap/distr/grid/DefaultGenotypeInitializer.java
src/org/jgap/distr/grid/DefaultWorkerReturnStrategy.java
src/org/jgap/distr/grid/DummyGridClientMediator.java
src/org/jgap/distr/grid/gp/
src/org/jgap/distr/grid/gp/DefaultEvolveStrategyGP.java
src/org/jgap/distr/grid/gp/GridConfigurationGPBase.java
src/org/jgap/distr/grid/gp/IClientEvolveStrategyGP.java
src/org/jgap/distr/grid/gp/IClientFeedbackGP.java
src/org/jgap/distr/grid/gp/IGenotypeInitializerGP.java
src/org/jgap/distr/grid/gp/IGridConfigurationGP.java
src/org/jgap/distr/grid/gp/IRequestSplitStrategyGP.java
src/org/jgap/distr/grid/gp/IWorkerEvolveStrategyGP.java
src/org/jgap/distr/grid/gp/IWorkerReturnStrategyGP.java
src/org/jgap/distr/grid/gp/JGAPClientGP.java
src/org/jgap/distr/grid/gp/JGAPRequestGP.java
src/org/jgap/distr/grid/gp/JGAPResultGP.java
src/org/jgap/distr/grid/gp/JGAPWorkerGP.java
src/org/jgap/distr/grid/gp/JGAPWorkersGP.java
src/org/jgap/distr/grid/gp/NullClientFeedbackGP.java
src/org/jgap/distr/grid/gp/package.html
src/org/jgap/distr/grid/GridConfigurationBase.java
src/org/jgap/distr/grid/IClientEvolveStrategy.java
src/org/jgap/distr/grid/IClientFeedback.java
src/org/jgap/distr/grid/IEvolveStrategy.java
src/org/jgap/distr/grid/IGenotypeInitializer.java
src/org/jgap/distr/grid/IGridClientMediator.java
src/org/jgap/distr/grid/IGridConfiguration.java
src/org/jgap/distr/grid/IGridMasterConnectionListener.java
src/org/jgap/distr/grid/IRequestSplitStrategy.java
src/org/jgap/distr/grid/IResultMergeStrategy.java
src/org/jgap/distr/grid/IWorkerEvolveStrategy.java
src/org/jgap/distr/grid/IWorkerReturnStrategy.java
src/org/jgap/distr/grid/JGAPAdmin.java
src/org/jgap/distr/grid/JGAPClient.java
src/org/jgap/distr/grid/JGAPClientHandlerThread.java
src/org/jgap/distr/grid/JGAPRequest.java
src/org/jgap/distr/grid/JGAPResult.java
src/org/jgap/distr/grid/JGAPServer.java
src/org/jgap/distr/grid/JGAPWorker.java
src/org/jgap/distr/grid/JGAPWorkers.java
src/org/jgap/distr/grid/MessageContext.java
src/org/jgap/distr/grid/package.html
src/org/jgap/distr/grid/request/
src/org/jgap/distr/grid/RequestSplitStrategy.java
src/org/jgap/distr/grid/request/package.html
src/org/jgap/distr/grid/request/Status.java
src/org/jgap/distr/grid/request/VersionInfo.java
src/org/jgap/distr/grid/SampleSplitStrategy.java
src/org/jgap/distr/grid/util/
src/org/jgap/distr/grid/util/GridKit.java
src/org/jgap/distr/grid/util/package.html
src/org/jgap/distr/grid/wan/
src/org/jgap/distr/grid/wan/package.html
src/org/jgap/distr/IPopulationMerger.java
src/org/jgap/distr/IWorker.java
src/org/jgap/distr/Master.java
src/org/jgap/distr/MasterInfo.java
src/org/jgap/distr/MasterListener.java
src/org/jgap/distr/package.html
src/org/jgap/distr/Problem.java
src/org/jgap/distr/RequestDispatcher.java
src/org/jgap/distr/sockets/
src/org/jgap/distr/sockets/package.html
src/org/jgap/distr/Worker.java
src/org/jgap/distr/WorkerCommand.java
src/org/jgap/distr/WorkerListener.java
src/org/jgap/eval/
src/org/jgap/eval/package.html
src/org/jgap/eval/PopulationHistory.java
src/org/jgap/event/
src/org/jgap/event/EventManager.java
src/org/jgap/event/GeneticEvent.java
src/org/jgap/event/GeneticEventListener.java
src/org/jgap/event/IEventManager.java
src/org/jgap/event/package.html
src/org/jgap/FitnessEvaluator.java
src/org/jgap/FitnessFunction.java
src/org/jgap/Gene.java
src/org/jgap/GeneticOperator.java
src/org/jgap/Genotype.java
src/org/jgap/gp/
src/org/jgap/gp/BaseGPChromosome.java
src/org/jgap/gp/CommandGene.java
src/org/jgap/gp/CrossMethod.java
src/org/jgap/gp/function/
src/org/jgap/gp/function/Add.java
src/org/jgap/gp/function/Add3.java
src/org/jgap/gp/function/AddAndStore.java
src/org/jgap/gp/function/AddAndStoreTerminal.java
src/org/jgap/gp/function/ADF.java
src/org/jgap/gp/function/And.java
src/org/jgap/gp/function/Cosine.java
src/org/jgap/gp/function/Divide.java
src/org/jgap/gp/function/Equals.java
src/org/jgap/gp/function/ExchangeMemory.java
src/org/jgap/gp/function/Exp.java
src/org/jgap/gp/function/ForLoop.java
src/org/jgap/gp/function/ForXLoop.java
src/org/jgap/gp/function/GreaterThan.java
src/org/jgap/gp/function/If.java
src/org/jgap/gp/function/IfElse.java
src/org/jgap/gp/function/Increment.java
src/org/jgap/gp/function/IncrementMemory.java
src/org/jgap/gp/function/LesserThan.java
src/org/jgap/gp/function/Loop.java
src/org/jgap/gp/function/Modulo.java
src/org/jgap/gp/function/Multiply.java
src/org/jgap/gp/function/Multiply3.java
src/org/jgap/gp/function/Not.java
src/org/jgap/gp/function/Or.java
src/org/jgap/gp/function/package.html
src/org/jgap/gp/function/Pop.java
src/org/jgap/gp/function/Pow.java
src/org/jgap/gp/function/Push.java
src/org/jgap/gp/function/ReadTerminal.java
src/org/jgap/gp/function/ReadTerminalIndexed.java
src/org/jgap/gp/function/Sine.java
src/org/jgap/gp/function/StoreTerminal.java
src/org/jgap/gp/function/StoreTerminalIndexed.java
src/org/jgap/gp/function/SubProgram.java
src/org/jgap/gp/function/Subtract.java
src/org/jgap/gp/function/TransferMemory.java
src/org/jgap/gp/function/Xor.java
src/org/jgap/gp/GPFitnessFunction.java
src/org/jgap/gp/GPProblem.java
src/org/jgap/gp/GPProgramBase.java
src/org/jgap/gp/IComplexCommand.java
src/org/jgap/gp/IGPChromosome.java
src/org/jgap/gp/IGPFitnessEvaluator.java
src/org/jgap/gp/IGPGeneticOperator.java
src/org/jgap/gp/IGPInitStrategy.java
src/org/jgap/gp/IGPProgram.java
src/org/jgap/gp/impl/
src/org/jgap/gp/impl/BranchTypingCross.java
src/org/jgap/gp/impl/CommandFactory.java
src/org/jgap/gp/impl/DefaultGPFitnessEvaluator.java
src/org/jgap/gp/impl/DefaultPopulationCreator.java
src/org/jgap/gp/impl/DefaultProgramCreator.java
src/org/jgap/gp/impl/DeltaGPFitnessEvaluator.java
src/org/jgap/gp/impl/FitnessProportionateSelection.java
src/org/jgap/gp/impl/GPConfiguration.java
src/org/jgap/gp/impl/GPGenotype.java
src/org/jgap/gp/impl/GPPopulation.java
src/org/jgap/gp/impl/GPProgram.java
src/org/jgap/gp/impl/GPProgramFitnessComparator.java
src/org/jgap/gp/impl/GPProgramInfo.java
src/org/jgap/gp/impl/JGAPTreeBranchRenderer.java
src/org/jgap/gp/impl/JGAPTreeNode.java
src/org/jgap/gp/impl/JGAPTreeNodeRenderer.java
src/org/jgap/gp/impl/package.html
src/org/jgap/gp/impl/ProgramChromosome.java
src/org/jgap/gp/impl/StaticPopulationCreator.java
src/org/jgap/gp/impl/TournamentSelector.java
src/org/jgap/gp/IMutateable.java
src/org/jgap/gp/INaturalGPSelector.java
src/org/jgap/gp/INodeValidator.java
src/org/jgap/gp/IPopulationCreator.java
src/org/jgap/gp/IProgramCreator.java
src/org/jgap/gp/MathCommand.java
src/org/jgap/gp/package.html
src/org/jgap/gp/terminal/
src/org/jgap/gp/terminal/Argument.java
src/org/jgap/gp/terminal/Constant.java
src/org/jgap/gp/terminal/False.java
src/org/jgap/gp/terminal/NOP.java
src/org/jgap/gp/terminal/package.html
src/org/jgap/gp/terminal/Terminal.java
src/org/jgap/gp/terminal/True.java
src/org/jgap/gp/terminal/Variable.java
src/org/jgap/gui/
src/org/jgap/gui/ConfigFrame.java
src/org/jgap/gui/GUIManager.java
src/org/jgap/gui/package.html
src/org/jgap/IApplicationData.java
src/org/jgap/IBreeder.java
src/org/jgap/IBusinessKey.java
src/org/jgap/IChromosome.java
src/org/jgap/IChromosomePool.java
src/org/jgap/ICloneHandler.java
src/org/jgap/ICompareToHandler.java
src/org/jgap/ICompositeGene.java
src/org/jgap/IGeneConstraintChecker.java
src/org/jgap/IGeneticOperatorConstraint.java
src/org/jgap/IHandler.java
src/org/jgap/IInitializer.java
src/org/jgap/IJGAPFactory.java
src/org/jgap/impl/
src/org/jgap/impl/AveragingCrossoverOperator.java
src/org/jgap/impl/BestChromosomesSelector.java
src/org/jgap/impl/BooleanGene.java
src/org/jgap/impl/BulkFitnessOffsetRemover.java
src/org/jgap/impl/CauchyRandomGenerator.java
src/org/jgap/impl/ChainOfSelectors.java
src/org/jgap/impl/ChromosomePool.java
src/org/jgap/impl/CompositeGene.java
src/org/jgap/impl/CrossoverOperator.java
src/org/jgap/impl/DefaultCloneHandler.java
src/org/jgap/impl/DefaultCompareToHandler.java
src/org/jgap/impl/DefaultConfiguration.java
src/org/jgap/impl/DefaultCrossoverRateCalculator.java
src/org/jgap/impl/DefaultInitializer.java
src/org/jgap/impl/DefaultMutationRateCalculator.java
src/org/jgap/impl/DoubleGene.java
src/org/jgap/impl/fitness/
src/org/jgap/impl/fitness/package.html
src/org/jgap/impl/fitness/TruthTableFitnessFunction.java
src/org/jgap/impl/FittestPopulationMerger.java
src/org/jgap/impl/FixedBinaryGene.java
src/org/jgap/impl/GABreeder.java
src/org/jgap/impl/GaussianMutationOperator.java
src/org/jgap/impl/GaussianRandomGenerator.java
src/org/jgap/impl/GreedyCrossover.java
src/org/jgap/impl/IntegerGene.java
src/org/jgap/impl/InversionOperator.java
src/org/jgap/impl/JGAPFactory.java
src/org/jgap/impl/job/
src/org/jgap/impl/job/EvolveData.java
src/org/jgap/impl/job/EvolveJob.java
src/org/jgap/impl/job/EvolveResult.java
src/org/jgap/impl/job/IEvolveJob.java
src/org/jgap/impl/job/IJob.java
src/org/jgap/impl/job/IPopulationSplitter.java
src/org/jgap/impl/job/JobBase.java
src/org/jgap/impl/job/JobData.java
src/org/jgap/impl/job/JobResult.java
src/org/jgap/impl/job/MaxFunction.java
src/org/jgap/impl/job/package.html
src/org/jgap/impl/job/SimpleJobConsumer.java
src/org/jgap/impl/job/SimplePopulationSplitter.java
src/org/jgap/impl/MapGene.java
src/org/jgap/impl/MutationOperator.java
src/org/jgap/impl/NumberGene.java
src/org/jgap/impl/package.html
src/org/jgap/impl/Pool.java
src/org/jgap/impl/RangedSwappingMutationOperator.java
src/org/jgap/impl/salesman/
src/org/jgap/impl/salesman/package.html
src/org/jgap/impl/salesman/Salesman.java
src/org/jgap/impl/salesman/SalesmanFitnessFunction.java
src/org/jgap/impl/SetGene.java
src/org/jgap/impl/StandardPostSelector.java
src/org/jgap/impl/StockRandomGenerator.java
src/org/jgap/impl/StringGene.java
src/org/jgap/impl/SwappingMutationOperator.java
src/org/jgap/impl/ThresholdSelector.java
src/org/jgap/impl/TournamentSelector.java
src/org/jgap/impl/TwoWayMutationOperator.java
src/org/jgap/impl/WeightedRouletteSelector.java
src/org/jgap/INaturalSelector.java
src/org/jgap/InvalidConfigurationException.java
src/org/jgap/IPersistentRepresentation.java
src/org/jgap/IUniversalRateCalculator.java
src/org/jgap/NaturalSelector.java
src/org/jgap/NaturalSelectorExt.java
src/org/jgap/package.html
src/org/jgap/Population.java
src/org/jgap/RandomGenerator.java
src/org/jgap/supergenes/
src/org/jgap/supergenes/AbstractSupergene.java
src/org/jgap/supergenes/package.html
src/org/jgap/supergenes/Supergene.java
src/org/jgap/supergenes/SupergeneValidator.java
src/org/jgap/supergenes/Validator.java
src/org/jgap/UnsupportedRepresentationException.java
src/org/jgap/util/
src/org/jgap/util/ChromosomeFitnessComparator.java
src/org/jgap/util/ClassKit.java
src/org/jgap/util/CloneException.java
src/org/jgap/util/CommandResult.java
src/org/jgap/util/DateKit.java
src/org/jgap/util/FileKit.java
src/org/jgap/util/ICloneable.java
src/org/jgap/util/ICommand.java
src/org/jgap/util/JarClassLoader.java
src/org/jgap/util/JarResources.java
src/org/jgap/util/LRUCache.java
src/org/jgap/util/MultiClassLoader.java
src/org/jgap/util/NetworkKit.java
src/org/jgap/util/NumberKit.java
src/org/jgap/util/package.html
src/org/jgap/util/PersistableObject.java
src/org/jgap/util/PluginDiscoverer.java
src/org/jgap/util/randomHotBits.java
src/org/jgap/util/randomJava.java
src/org/jgap/util/randomLCG.java
src/org/jgap/util/randomLEcuyer.java
src/org/jgap/util/randomMCG.java
src/org/jgap/util/randomX.java
src/org/jgap/util/StringKit.java
src/org/jgap/util/SystemKit.java
src/org/jgap/util/tree/
src/org/jgap/util/tree/TreeBranchRenderer.java
src/org/jgap/util/tree/TreeNodeRenderer.java
src/org/jgap/util/tree/TreeVisualizer.java
src/org/jgap/util/UniqueRandomGenerator.java
src/org/jgap/xml/
src/org/jgap/xml/GeneCreationException.java
src/org/jgap/xml/ImproperXMLException.java
src/org/jgap/xml/package.html
src/org/jgap/xml/XMLDocumentBuilder.java
src/org/jgap/xml/XMLManager.java
start_example.bat
start_gp_anttrail.bat
start_gp_fibonacci.bat
start_gp_mathproblem.bat
start_grid_example.bat
start_grid_server.bat
start_grid_worker.bat
tests/
tests/org/
tests/org/jgap/
tests/org/jgap/AllBaseTests.java
tests/org/jgap/AllTests.java
tests/org/jgap/audit/
tests/org/jgap/audit/AllAuditTests.java
tests/org/jgap/audit/EvaluatorTest.java
tests/org/jgap/audit/KeyedValues2DTest.java
tests/org/jgap/audit/KeyedValuesTest.java
tests/org/jgap/audit/KeyedValueTest.java
tests/org/jgap/audit/PermutingConfigurationTest.java
tests/org/jgap/BaseGeneTest.java
tests/org/jgap/BaseRateCalculatorTest.java
tests/org/jgap/ChromosomeForTesting.java
tests/org/jgap/ChromosomeTest.java
tests/org/jgap/ConfigurationForTesting.java
tests/org/jgap/ConfigurationTest.java
tests/org/jgap/data/
tests/org/jgap/data/AllDataTests.java
tests/org/jgap/data/config/
tests/org/jgap/data/config/AllConfigTests.java
tests/org/jgap/data/config/ConfigPropertyTest.java
tests/org/jgap/data/config/MetaConfigTest.java
tests/org/jgap/data/config/RootConfigurationHandlerTest.java
tests/org/jgap/data/DataElementsDocumentTest.java
tests/org/jgap/data/DataElementTest.java
tests/org/jgap/data/DataTreeBuilderTest.java
tests/org/jgap/DefaultFitnessEvaluatorTest.java
tests/org/jgap/DeltaFitnessEvaluatorTest.java
tests/org/jgap/distr/
tests/org/jgap/distr/AllDistrTests.java
tests/org/jgap/distr/CultureMemoryCellTest.java
tests/org/jgap/distr/CultureTest.java
tests/org/jgap/distr/grid/
tests/org/jgap/distr/grid/AllGridTests.java
tests/org/jgap/distr/grid/DefaultGenotypeInitializerTest.java
tests/org/jgap/distr/ProblemTest.java
tests/org/jgap/eval/
tests/org/jgap/eval/AllEvalTests.java
tests/org/jgap/eval/PopulationHistoryTest.java
tests/org/jgap/event/
tests/org/jgap/event/AllEventTests.java
tests/org/jgap/event/EventManagerTest.java
tests/org/jgap/event/GeneticEventTest.java
tests/org/jgap/ext/
tests/org/jgap/ext/AllExtTests.java
tests/org/jgap/FitnessFunctionTest.java
tests/org/jgap/GenotypeTest.java
tests/org/jgap/gp/
tests/org/jgap/gp/AllGPTests.java
tests/org/jgap/gp/CommandGeneTest.java
tests/org/jgap/gp/GPTestCase.java
tests/org/jgap/gp/impl/
tests/org/jgap/gp/impl/AllGPImplTests.java
tests/org/jgap/gp/impl/BranchTypingCrossTest.java
tests/org/jgap/gp/impl/DefaultGPFitnessEvaluatorTest.java
tests/org/jgap/gp/impl/DeltaGPFitnessEvaluatorTest.java
tests/org/jgap/gp/impl/GPConfigurationTest.java
tests/org/jgap/gp/impl/GPGenotypeTest.java
tests/org/jgap/gp/impl/GPPopulationTest.java
tests/org/jgap/gp/impl/GPProgramTest.java
tests/org/jgap/gp/impl/NodeValidatorForTesting.java
tests/org/jgap/gp/impl/ProgramChromosomeTest.java
tests/org/jgap/gp/impl/StaticGPFitnessFunction.java
tests/org/jgap/gui/
tests/org/jgap/gui/AllGUITests.java
tests/org/jgap/gui/ConfigWriterTest.java
tests/org/jgap/gui/MockConfigInfoForTesting.java
tests/org/jgap/impl/
tests/org/jgap/impl/AllImplTests.java
tests/org/jgap/impl/AveragingCrossoverOperatorTest.java
tests/org/jgap/impl/BestChromosomesSelectorTest.java
tests/org/jgap/impl/BooleanGeneTest.java
tests/org/jgap/impl/BulkFitnessOffsetRemoverTest.java
tests/org/jgap/impl/CauchyRandomGeneratorTest.java
tests/org/jgap/impl/ChainOfSelectorsTest.java
tests/org/jgap/impl/ChromosomePoolTest.java
tests/org/jgap/impl/CompositeGenePersistentReprTest.java
tests/org/jgap/impl/CompositeGeneTest.java
tests/org/jgap/impl/CrossoverOperatorTest.java
tests/org/jgap/impl/DefaultCloneHandlerTest.java
tests/org/jgap/impl/DefaultCompareToHandlerTest.java
tests/org/jgap/impl/DefaultConfigurationTest.java
tests/org/jgap/impl/DefaultCrossoverRateCalculatorTest.java
tests/org/jgap/impl/DefaultInitializerTest.java
tests/org/jgap/impl/DefaultMutationRateCalculatorTest.java
tests/org/jgap/impl/DoubleGeneTest.java
tests/org/jgap/impl/fitness/
tests/org/jgap/impl/fitness/AllFitnessTests.java
tests/org/jgap/impl/fitness/TruthTableFitnessFunctionTest.java
tests/org/jgap/impl/FittestPopulationMergerTest.java
tests/org/jgap/impl/FixedBinaryGeneTest.java
tests/org/jgap/impl/GaussianMutationOperatorTest.java
tests/org/jgap/impl/GaussianRandomGeneratorTest.java
tests/org/jgap/impl/GreedyCrossoverTest.java
tests/org/jgap/impl/HotBitsRandomGenerator.java
tests/org/jgap/impl/IntegerGeneTest.java
tests/org/jgap/impl/InversionOperatorTest.java
tests/org/jgap/impl/JGAPFactoryTest.java
tests/org/jgap/impl/job/
tests/org/jgap/impl/job/AllJobTests.java
tests/org/jgap/impl/job/EvolveDataTest.java
tests/org/jgap/impl/MapGeneTest.java
tests/org/jgap/impl/MutationOperatorTest.java
tests/org/jgap/impl/NumberGeneTest.java
tests/org/jgap/impl/PoolTest.java
tests/org/jgap/impl/RandomFitnessFunction.java
tests/org/jgap/impl/RandomGeneratorForTesting.java
tests/org/jgap/impl/salesman/
tests/org/jgap/impl/salesman/AllSalesmanTests.java
tests/org/jgap/impl/salesman/TravellingSalesmanTest.java
tests/org/jgap/impl/SetGeneTest.java
tests/org/jgap/impl/StaticFitnessFunction.java
tests/org/jgap/impl/StockRandomGeneratorTest.java
tests/org/jgap/impl/StringGeneTest.java
tests/org/jgap/impl/SwappingMutationOperatorTest.java
tests/org/jgap/impl/ThresholdSelectorTest.java
tests/org/jgap/impl/TournamentSelectorTest.java
tests/org/jgap/impl/TwoWayMutationOperatorTest.java
tests/org/jgap/impl/WeightedRouletteSelectorTest.java
tests/org/jgap/JGAPTestCase.java
tests/org/jgap/perf/
tests/org/jgap/perf/package.html
tests/org/jgap/perf/TestOverallPerformance.java
tests/org/jgap/perf/TestOverallPerformanceFitnessFunc.java
tests/org/jgap/PopulationTest.java
tests/org/jgap/supergenes/
tests/org/jgap/supergenes/AllSupergenesTests.java
tests/org/jgap/supergenes/InstantiableSupergeneForTesting.java
tests/org/jgap/supergenes/package.html
tests/org/jgap/supergenes/SupergeneInternalParserTest.java
tests/org/jgap/supergenes/SupergenePersistentRepresentationTest.java
tests/org/jgap/util/
tests/org/jgap/util/AllUtilTests.java
tests/org/jgap/util/NumberKitTest.java
tests/org/jgap/util/PluginDiscovererTest.java
tests/org/jgap/util/TestHashcode.java
tests/org/jgap/xml/
tests/org/jgap/xml/AllXMLTests.java
tests/org/jgap/xml/XMLDocumentBuilderTest.java
tests/org/jgap/xml/XMLManagerTest.java